Overview
10:15 am – 11:45 am,
building E2 1, room 007,
starting on October 14th
biweekly, first tutorial: tba
To be announced
Information
Please send an email to Kerstin Gronow-Pudelek if you want to be added to the MS Teams group of the course.
This course can be used as a “Spezialvorlesung der Bioinformatik/Special-topic Lecture Bioinformatics”.
Requirements
Intermediate programming skills in Python
Content
- clustering of data
- principal component analysis
- differential expression analysis
- removal and correction of data outliers; prediction of missing values
- processing of proteomics data; imputation of missing values
- peak assignment
- shape detection
- functional annotation
- protein structure data (Protein DataBank); thermal mobility; titration states; hydration sites; PDBcheck
- molecular dynamics simulations; time correlation of snapshots
- multi-variate analysis
- analysis of multi-dimensional data; data integration
Conditions for Certification
Students need to pass the final exam.
There will be about six bi-weekly graded assignments and tutorial sessions. Students need to get at least 50% of the points from the assignments to be admitted to the final exam.
Certification (Schein)
Students need to pass the final exam that will be scheduled near the end of the winter semester or the re-exam that will be scheduled at the beginning of the following summer semester.
Lectures
Lectures take place on Tuesdays from 10:15 am to 11:45 am in building E2.1 room 001. The lecture slides are available in the Microsoft Teams group in the “General” channel under “Files”.
Tutorials
Biweekly, to be announced